dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05062
Location and strand information: 5418 - 8492 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05063
Location and strand information: 8513 - 10237 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05064
Location and strand information: 10547 - 12622 (+)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 6.4667
Protein molecular weight: 78811.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05065
Location and strand information: 12676 - 16731 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05066
Location and strand information: 16973 - 19648 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7337
Protein molecular weight: 101269.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05067
Location and strand information: 20213 - 23374 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05068
Location and strand information: 23387 - 25075 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05069
Location and strand information: 25109 - 25486 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05070
Location and strand information: 25560 - 26981 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1463
Protein molecular weight: 51758.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05071
Location and strand information: 27118 - 29817 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.5799
Protein molecular weight: 102656.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05072
Location and strand information: 29814 - 32411 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.1649
Protein molecular weight: 100354.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05073
Location and strand information: 32434 - 33624 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 7.439
Protein molecular weight: 45119.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05074
Location and strand information: 33637 - 35100 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6404
Protein molecular weight: 52997.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05075
Location and strand information: 35111 - 39871 (+)
Family: GH78|PL8_3|PL8|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2512
Protein molecular weight: 178123.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05076
Location and strand information: 39987 - 40760 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein YpdB

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05077
Location and strand information: 40773 - 41777 (+)
Family: 9.B.33.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05078
Location and strand information: 41907 - 42809 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05079
Location and strand information: 43326 - 43709 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05080
Location and strand information: 44043 - 46385 (-)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.511
Protein molecular weight: 87996.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05081
Location and strand information: 46442 - 49249 (-)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3924
Protein molecular weight: 106805.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05082
Location and strand information: 49339 - 52407 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05083
Location and strand information: 52911 - 54440 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05084
Location and strand information: 54454 - 57597 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05085
Location and strand information: 57728 - 61078 (-)
Family: TPR_1+TPR_2+TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05086
Location and strand information: 61091 - 62479 (-)
Family: 2.A.1.1.3
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05087
Location and strand information: 62638 - 63525 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000001422_7|CGC1
Gene ID: MGYG000001422_05088
Location and strand information: 63649 - 66156 (-)
Family: 9.B.144.1.4
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001422_05062	TonB-dependent receptor SusC	TC	5418	8492	+	1.B.14.6.1
MGYG000001422_05063	hypothetical protein	TC	8513	10237	+	8.A.46.1.6
MGYG000001422_05064	Chondroitinase-AC	CAZyme	10547	12622	+	PL8_3\| PL8
MGYG000001422_05065	Sensor histidine kinase RcsC	TF	12676	16731	-	HTH_AraC
MGYG000001422_05066	hypothetical protein	CAZyme	16973	19648	+	GH78\| CBM67
MGYG000001422_05067	hypothetical protein	TC	20213	23374	+	1.B.14.6.1
MGYG000001422_05068	SusD-like protein	TC	23387	25075	+	8.A.46.1.3
MGYG000001422_05069	hypothetical protein	null	25109	25486	+	No domain
MGYG000001422_05070	hypothetical protein	CAZyme	25560	26981	+	GH28
MGYG000001422_05071	Exo-beta-D-glucosaminidase	CAZyme	27118	29817	+	GH2
MGYG000001422_05072	Exo-beta-D-glucosaminidase	CAZyme	29814	32411	+	GH2
MGYG000001422_05073	Unsaturated chondroitin disaccharide hydrolase	CAZyme	32434	33624	+	GH88
MGYG000001422_05074	hypothetical protein	CAZyme	33637	35100	+	GH28
MGYG000001422_05075	hypothetical protein	CAZyme	35111	39871	+	GH78\| PL8_3\| PL8\| CBM67
MGYG000001422_05076	Transcriptional regulatory protein YpdB	TF	39987	40760	+	LytTR
MGYG000001422_05077	hypothetical protein	TC	40773	41777	+	9.B.33.1.2
MGYG000001422_05078	hypothetical protein	null	41907	42809	+	DUF6268
MGYG000001422_05079	hypothetical protein	null	43326	43709	+	No domain
MGYG000001422_05080	hypothetical protein	CAZyme	44043	46385	-	GH35
MGYG000001422_05081	Beta-galactosidase	CAZyme	46442	49249	-	GH2\| CBM32
MGYG000001422_05082	hypothetical protein	null	49339	52407	-	Glyco_hydro_2
MGYG000001422_05083	hypothetical protein	null	52911	54440	-	SusD-like_3\| SusD_RagB
MGYG000001422_05084	TonB-dependent receptor SusC	TC	54454	57597	-	1.B.14.6.1
MGYG000001422_05085	hypothetical protein	STP	57728	61078	-	TPR_1\| TPR_2\| TPR_2
MGYG000001422_05086	D-xylose-proton symporter	TC	61091	62479	-	2.A.1.1.3
MGYG000001422_05087	Arabinose operon regulatory protein	TF	62638	63525	+	HTH_AraC+HTH_AraC
MGYG000001422_05088	hypothetical protein	TC	63649	66156	-	9.B.144.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature